PySCeS 0.2.0

The Python Simulator for Cellular Systems - simulation and analysis tools for modelling biological systems

Package Documentation

Latest Version: 0.8.0

PySCeS is developed by the Triple-J Group for Molecular Cell Physiology in order to try model and understand the complex processes and systems which make up the living cell.

PySCeS features, amongst other things:

• A text based model description language.
• A structural analysis module.
• Integrators for time simulation
• Non-linear solvers for steady-state analysis
• A module for performing Metabolic Control Analysis
• A bifurcation module for systems which exhibit multiple steady states
• A variety of extra utilites for parameter scans, data output and plotting.
• A dynamic module loading framework.
• SBML import and export capability.

• Author: Brett G. Olivier
• Maintainer: Brett G. Olivier
• Documentation: PySCeS package documentation
• Home Page: http://pysces.sourceforge.net
• Download URL: http://pysces.sourceforge.net/download.html
• Keywords: computational systems biology, modelling, simulation
• Requires scipy
• Categories
  • Development Status :: 4 - Beta
  • Environment :: Console
  • Intended Audience :: End Users/Desktop
  • Intended Audience :: Science/Research
  • License :: OSI Approved :: GNU General Public License (GPL)
  • Natural Language :: English
  • Operating System :: OS Independent
  • Programming Language :: Fortran
  • Programming Language :: Python
  • Topic :: Scientific/Engineering :: Bio-Informatics
  • Topic :: Scientific/Engineering :: Chemistry
• Package Index Owner: bgoli
• Package Index Maintainer: jrohwer
• DOAP record: PySCeS-0.2.0.xml