22 projects
irt-parameter-estimation
Parameter estimation routines for logistic Item Characteristic Curves (ICC) from Item Response Theory (IRT)
SeedWaterSegmenter
graphical program to interactively segment image stacks of cells in tissue with edge-labels (aka. white outlines)
FilenameSort
utility to aid in natural or "human-like" sorting of file names
ImageContour
construct and use linear paths around simply-connected binary and greyscale images
np-utils
collection of utilities for array and list manipulation
simple-metrics-manager
Just a simple system to manage a set of metrics (string name / function / returned data) that supports caching (memory and disk)
wxPyGameVideoPlayer
Just a simple video player using wxPython, PyGame, and OpenCV
cmpGen
cmpGen is deprecated; it is maintained here for legacy purposes
metrics-manager
Generic system for defining, handling, storing, and loading metrics
render-d3-fdg
Render d3 force directed graphs from python
pyslices-ipynb-conversion
conversion functions between pyslices and ipynb files
mtm_stats
Highly efficient set statistics about many-to-many relationships
sparse_dot
Highly efficient set statistics about many-to-many relationships
EllipseFitter
find best fit ellipses of binary images
GifTiffLoader
automatically load multi-dimensional Tiff and Gif files and file sequences as numpy arrays using PIL
json_scheming
Tools to build pseudo-schemas from json (and nested lists of dicts)
mpl_utils
plotting utilites build around matplotlib
human_time_formatter
Human-readable time delta formatter with relative precision ("ndigits")
columnar_records
A dataframe-like object but simpler (basically a list of numpy arrays on steroids)
Cpyx
gcc/cython/distutils wrapper for compiling Cython and C code directly from python
wx_py
Py Suite including PyCrust and a revamped version, PySlices
coo_utils
utilities for managing nested lists of lists of scipy.sparse matrices
