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An intuitive app for statistical analysis

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What is BIOSTATS

  • BIOSTATS is an intuitive app for statistical analysis.
  • It is free and open-source.
  • It works on Windows / Linux.

You can perform tests with a few clicks

t-Test

ANOVA

Chi-Square Test

Regression

You can visualize plots with a few clicks

Histogram

Box Plot

Regression Plot

Multiple Plot

BIOSTATS includes these tests:

Basic t-Test ANOVA Exact Test Chi-Square Test
Numeric One-Sample t-Test One-Way ANOVA Binomial Test Chi-Square Test
Numeric (Grouped) Two-Sample t-Test Two-Way ANOVA Fisher's Exact Test Chi-Square Test (Fit)
Categorical Paired t-Test One-Way ANCOVA McNemar's Exact Test McNemar's Test
Contingency Pairwise t-Test Two-Way ANCOVA Mantel-Haenszel Test
Multivariate ANOVA
Repeated Measures ANOVA

Linear Regression Logistic Regression Nonparametric Others
Correlation Simple Logistic Regression Sign Test Screening Test
Correlation Matrix Multiple Logistic Regression Median Test Epidemiologic Study
Simple Linear Regression Ordered Logistic Regression Wilcoxon Signed-Rank Test Factor Analysis
Multiple Linear Regression Multinomial Logistic Regression Wilcoxon Rank-Sum Test Principal Component Analysis
Kruskal-Wallis Test Linear Discriminant Analysis
Friedman Test
Spearman's Rank Correlation

BIOSTATS includes these plots:

Distribution Categorical Relational Multiple Others
Histogram Count Plot Scatter Plot Ultimate Plot Heatmap
Density Plot Strip Plot Line Plot Pair Plot FA Plot
Cumulative Plot Swarm Plot Regression Plot Joint Plot PCA Plot
2D Histogram Box Plot LDA Plot
2D Density Plot Boxen Plot
Violin Plot
Bar Plot

Quick Start

Downloads

The application can be downloaded from the links below:

Windows : https://github.com/hikarimusic/BIOSTATS/releases/latest/download/BIOSTATS.exe

Linux : https://github.com/hikarimusic/BIOSTATS/releases/latest/download/BIOSTATS

(Your computer may warn you not to run BIOSTATS.exe for security concerns. Please ingore it and run it anyway. There is definitely no virus in BIOSTATS because I don't know how to write a virus :D)

(It might take about 10 seconds to open the program. Please give BIOSTATS some time!)

(In Linux, you may need to permit the execution by chmod +x BIOSTATS before running the program.)

Examples

You can open examples from Help > Examples. Sample datasets will be imported, and all the options will be automatically set.

Install Package

For programmers, you can install the package from pip:

pip install biostatistics

The main window can be called directly:

biostats

You can also import biostats and use the functions:

:~$ python3
>>> import biostats as bs
>>> data = bs.dataset("one_way_anova.csv")
>>> summary, result = bs.one_way_anova(data=data, variable="Length", between="Location")
>>> summary
     Location  Count      Mean  Std. Deviation  95% CI: Lower  95% CI: Upper
1   Tillamook     10  0.080200        0.011963       0.071642       0.088758
2     Newport      8  0.074800        0.008597       0.067613       0.081987
3  Petersburg      7  0.103443        0.016209       0.088452       0.118434
4     Magadan      8  0.078012        0.012945       0.067190       0.088835
5   Tvarminne      6  0.095700        0.012962       0.082098       0.109302
>>> result
          D.F.  Sum Square  Mean Square  F Statistic   p-value     
Location     4    0.004520     0.001130     7.121019  0.000281  ***
Residual    34    0.005395     0.000159          NaN       NaN  NaN

More

More information can be found on the official website.

If you have any suggestion or find any bug, please contach me. We need your help!

If you use BIOSTATS in your research, it's a good idea to cite the paper of BIOSTATS.

  • Citation: working

References:

McDonald, John H. Handbook of biological statistics. Vol. 2. Baltimore, MD: sparky house publishing, 2009.

Mangiafico, Salvatore S. "An R companion for the handbook of biological statistics." Available: rcompanion.org/documents/RCompanionBioStatistics.pdf.(January 2016) (2015).

Rosner, Bernard. Fundamentals of biostatistics. Cengage learning, 2015.

Zach. Statology. 2021, www.statology.org.

UCLA. Statistical Methods and Data Analytics. 2021, stats.oarc.ucla.edu.

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