Python implementation of the fastPHASE model

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Development Status
- 5 - Production/Stable
Intended Audience
- Science/Research
License
- OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)
Operating System
- OS Independent
Programming Language
- Cython
Topic
- Scientific/Engineering

Project description

fastphase

Python implementation of the Scheet and Stephens model and extensions.

If you use this package you must cite the original paper:

Paul Scheet and Matthew Stephens (2006) A Fast and Flexible Statistical Model for Large-Scale Population Genotype Data: Applications to Inferring Missing Genotypes and Haplotypic Phase The American Journal of Human Genetics 78(4):629-644 DOI.

Project details

These details have not been verified by PyPI

Project links

Homepage

GitHub Statistics

View statistics for this project via Libraries.io, or by using our public dataset on Google BigQuery

Development Status
- 5 - Production/Stable
Intended Audience
- Science/Research
License
- OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)
Operating System
- OS Independent
Programming Language
- Cython
Topic
- Scientific/Engineering

Release history Release notifications | RSS feed

This version

2.0.3

Jul 20, 2023

2.0.2

Jul 20, 2023

2.0.1

Jul 18, 2023

2.0

Apr 14, 2023

2.0.dev3 pre-release

Jun 24, 2020

2.0.dev2 pre-release

Jun 23, 2020

2.0.dev1 pre-release

Jun 23, 2020

2.0.dev0 pre-release

Jun 23, 2020

1.2

Jun 10, 2020

1.2.dev0 pre-release

Jun 5, 2020

1.1.3

Jun 3, 2020

1.1.2

May 29, 2020

1.1.1

May 20, 2020

1.1

May 20, 2020

1.0

Mar 20, 2020

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Source Distribution

fastphase-2.0.3.tar.gz (374.2 kB view hashes)

Uploaded Jul 20, 2023 Source

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Uploaded Jul 20, 2023 CPython 3.11 manylinux: glibc 2.5+ x86-64

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