Skip to main content

Access analyze75 formatted mass spec images

Project description

msiimport

Description

A convenience package for accessing mass spec image data stored as analyze75 formated files (.hdr, .img, .t2m).

If there is interest in further functionality, please create an issue to ask for features or filetype compatibility (imzML, ...).

No filetype writing is planned at this time.

Installation

Install msiimport with:

pip install msiimport

Example

# Get a 2D ndarray of data near an m/z peak

from msiimport import analyze75 as ana

#...

data = ana(path_to_dot_hdr)
image = data.getImage(peakmz=303.23, tolerance=0.4)

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

msiimport-0.1.0.tar.gz (2.4 kB view hashes)

Uploaded Source

Built Distribution

msiimport-0.1.0-py3-none-any.whl (3.5 kB view hashes)

Uploaded Python 3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page