pynldas2 0.16.0

PyNLDAS2: Hourly NLDAS-2 Forcing Data

Features

PyNLDAS2 is a part of HyRiver software stack that is designed to aid in hydroclimate analysis through web services. This package provides access NLDAS-2 Forcing dataset via Hydrology Data Rods. Currently, only hourly data is supported. There are three main functions:

• get_bycoords: Forcing data for a list of coordinates as a pandas.DataFrame or xarray.Dataset,

• get_bygeom: Forcing data within a geometry as a xarray.Dataset,

• get_grid_mask: NLDAS2 land/water grid mask as a xarray.Dataset.

PyNLDAS2 only provides access to the hourly NLDAS2 dataset, so if you need to access other NASA climate datasets you can check out tsgettoolbox developed by Tim Cera.

Moreover, under the hood, PyNLDAS2 uses PyGeoOGC and AsyncRetriever packages for making requests in parallel and storing responses in chunks. This improves the reliability and speed of data retrieval significantly.

You can control the request/response caching behavior and verbosity of the package by setting the following environment variables:

• HYRIVER_CACHE_NAME: Path to the caching SQLite database for asynchronous HTTP requests. It defaults to ./cache/aiohttp_cache.sqlite

• HYRIVER_CACHE_NAME_HTTP: Path to the caching SQLite database for HTTP requests. It defaults to ./cache/http_cache.sqlite

• HYRIVER_CACHE_EXPIRE: Expiration time for cached requests in seconds. It defaults to one week.

• HYRIVER_CACHE_DISABLE: Disable reading/writing from/to the cache. The default is false.

• HYRIVER_SSL_CERT: Path to a SSL certificate file.

For example, in your code before making any requests you can do:

import os

os.environ["HYRIVER_CACHE_NAME"] = "path/to/aiohttp_cache.sqlite"
os.environ["HYRIVER_CACHE_NAME_HTTP"] = "path/to/http_cache.sqlite"
os.environ["HYRIVER_CACHE_EXPIRE"] = "3600"
os.environ["HYRIVER_CACHE_DISABLE"] = "true"
os.environ["HYRIVER_SSL_CERT"] = "path/to/cert.pem"

You can find some example notebooks here.

You can also try using PyNLDAS2 without installing it on your system by clicking on the binder badge. A Jupyter Lab instance with the HyRiver stack pre-installed will be launched in your web browser, and you can start coding!

Moreover, requests for additional functionalities can be submitted via issue tracker.

Citation

If you use any of HyRiver packages in your research, we appreciate citations:

@article{Chegini_2021,
    author = {Chegini, Taher and Li, Hong-Yi and Leung, L. Ruby},
    doi = {10.21105/joss.03175},
    journal = {Journal of Open Source Software},
    month = {10},
    number = {66},
    pages = {1--3},
    title = {{HyRiver: Hydroclimate Data Retriever}},
    volume = {6},
    year = {2021}
}

Installation

You can install pynldas2 using pip:

$ pip install pynldas2

Alternatively, pynldas2 can be installed from the conda-forge repository using Conda:

$ conda install -c conda-forge pynldas2

Quick start

The NLDAS2 database provides forcing data at 1/8th-degree grid spacing and range from 01 Jan 1979 to present. Let’s take a look at NLDAS2 grid mask that includes land, water, soil, and vegetation masks:

import pynldas2 as nldas

grid = nldas.get_grid_mask()

Next, we use PyGeoHydro to get the geometry of a HUC8 with ID of 1306003, then we get the forcing data within the obtained geometry.

from pygeohydro import WBD

huc8 = WBD("huc8")
geometry = huc8.byids("huc8", "13060003").geometry[0]
clm = nldas.get_bygeom(geometry, "2010-01-01", "2010-01-31", 4326)

Road Map

• [ ] Add PET calculation functions similar to PyDaymet but at hourly timescale.

• [ ] Add a command line interfaces.

Contributing

Contributions are appreciated and very welcomed. Please read CONTRIBUTING.rst for instructions.