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VirtualMicrobes 0.1.4

Virtual Microbe Evolutionary Simulator

README

Virtual Microbes Evolutionary Simulator

Features

  • Individual based model of evolving microbes.
  • Explicit model of evolving genome.
  • Spatially extended environment.
  • Microbes evolve metabolic capacities to exploit environmental nutrients.

Dependencies and scripts

Install

pip install VirtualMicrobes

Usage

can’t wait to simulate:

vermicelli.py evo <simulation_dir>

open pandora’s box of options:

  • vermicelli.py --help
  • vermicelli.py evo --help

Documentation

http://virtualmicrobes.readthedocs.io/en/latest/ (in progress..) CHANGELOG ———

nothing changed here

 
File Type Py Version Uploaded on Size
VirtualMicrobes-0.1.4.tar.gz (md5) Source 2016-10-12 3MB