Utility modules for deploying workflows in the BBCF
Project description
bbcflib 1.4.0
Copyright 2011 EPFL BBCF <webmaster dot bbcf at epfl dot ch>
bbcflib is a set of Python modules for accessing facilities used by the Bioinformatics and Biostatistics Core Facility˘(BBCF) at the EPFL.
bbcflib is released under the GNU General Public License 3.0. A copy of this license is in the LICENSE.txt file.
Installation
bbcflib requires: * Python >=2.6 * mailer >=0.6 (http://pypi.python.org/pypi/mailer) * bein (http://bbcf.epfl.ch/bein/) * numpy (http://numpy.scipy.org/)
bbcflib doesn’t have regular releases, since it is an internally used library. You should download the latest source code from GitHub, either by going to
and clicking on “Downloads”, or by cloning the git repository with
$ git clone https://github.com/bbcf/bbcflib.git
Once you have the source code, run
$ python setup.py build $ sudo python setup.py install
to install it. If you need to install it in a particular directory, use
$ sudo python setup.py install –prefix=/prefix/path
Then the modules will go in /prefix/path/lib/pythonX.Y/site-packages, where X.Y is the version of Python you run it with.
To run the test suite, in the distribution directory, run
$ nosetests
Full documentation
The full documentation can be found [on our website](http://bbcf.epfl.ch/bbcflib).
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