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BioMAJ process service

Project description

# About

Experimental (in progress) microservice to manage the process execution of biomaj.

A protobuf interface is available in biomaj_process/message/message_pb2.py to exchange messages between BioMAJ and the download service. Messages go through RabbitMQ (to be installed).

# Protobuf

To compile protobuf, in biomaj_process/message:

protoc –python_out=. message.proto

# Development

flake8 biomaj_process

# Prometheus metrics

Endpoint: /api/process/metrics

# Run

## Message consumer: export BIOMAJ_CONFIG=path_to_config.yml python bin/biomaj_process_consumer.py

## Web server

export BIOMAJ_CONFIG=path_to_config.yml gunicorn biomaj_download.biomaj_process_web:app

Web processes should be behind a proxy/load balancer, API base url /api/download

3.0.1:

bug fixes

3.0.0:

move process management out of biomaj main package

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