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caspo 1.4

Learning Boolean logic models of protein signaling networks powered by PyASP and CellNOptR

Package Documentation

Latest Version: 3.0.1

For more information, contact details and bibliography, please visit caspo’s website.

1.4 (2013-06-10)

  • Use jumpy configuration by default for clasp
  • Adds –clasp command line option to use custom clasp’s paramaters

1.3 (2013-03-08)

  • OO refactoring
  • Replace deprecated optparse with argparse
  • Remove short options
  • Implements k-fold cross validation
  • Adds size tolerance as an option
  • Sphinx docs

1.2 (2013-02-05)

  • Depends on PyASP instead of BioASP
  • Package the full ASP encoding
  • Implements old BioASP’s functionality
  • Upgrade dependency on cellnopt.wrapper to 1.0.5

1.1 (2012-12-20)

  • Removes CellNOpt installation relying on cellnopt.wrapper

1.0 (2012-12-03)

  • Initial release
File Type Py Version Uploaded on Size
caspo-1.4.tar.gz (md5) Source 2013-06-10 26KB