Skip to main content

Add a short description here!

Project description

fastqtools is used to filter , split ,stat raw ngs data.

https://img.shields.io/pypi/v/fastqtools.svg https://readthedocs.org/projects/fastqtools/badge/?version=latest https://travis-ci.org/kongdeju/fastqtools.svg?branch=master

fastqClean

to clean low qual data, remove adaptor

fastqSplit

to split big fastq files to small ones

fastqStat

to qc fastq data , get q20,q30,gc-content etc.

Installation

by pip:

pip install fastqtools

by git:

git clone https://github.com/vienomics/fastqtools.git

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distributions

No source distribution files available for this release.See tutorial on generating distribution archives.

Built Distribution

fastqtools-0.3.3-py2.py3-none-any.whl (10.8 kB view hashes)

Uploaded Python 2 Python 3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page