HUMAnN2: The HMP Unified Metabolic Analysis Network 2

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  • License: MIT
  • Author: HUMAnN2 Development Team
  • Tags microbial, microbiome, bioinformatics, microbiology, metagenomic, metatranscriptomic, humann, humann2
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Project description

HUMAnN2 is a pipeline for efficiently and accurately determining the coverage and abundance of microbial pathways in a community from metagenomic data. Sequencing a metagenome typically produces millions of short DNA/RNA reads. This process, referred to as functional profiling, aims to describe the metabolic potential of a microbial community and its members. More generally, functional profiling answers the question: What are the microbes in my community-of-interest doing (or capable of doing)?

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