A Python project to visualize indels near Cas9 cutsites.

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License: GNU General Public License v3 or later (GPLv3+) (GPLv3+)

Author: Jenny Cheng and Harry Schwartz

Tags crispr, cas9, indels

Requires: Python >=3

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Project description

This package uses a SAM (Sequence Alignment Map) file and a reference CSV with the reference, N20, and PAM to output all the indels directly next to the Cas9 cutsite.

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Avatar for caretdashcaret from gravatar.com caretdashcaret

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View statistics for this project via Libraries.io, or by using our public dataset on Google BigQuery

Meta

License: GNU General Public License v3 or later (GPLv3+) (GPLv3+)

Author: Jenny Cheng and Harry Schwartz

Tags crispr, cas9, indels

Requires: Python >=3

Classifiers

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0.1

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indel-mapper-0.1.tar.gz (11.2 kB view hashes)

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