skip to navigation
skip to content

Not Logged In

mudicom 0.0.2

Read and extract images from a DICOM file using GDCM

Latest Version: 0.1.0

mudicom

A python package that validates, reads, and extracts images from a DICOM file.

Quick How To

import mudicom
mu = mudicom.load("mudicom/tests/dicoms/ex1.dcm")
# returns array of data elements as dicts
mu.read()
# returns dict of errors and warnings for DICOM
mu.validate()
# creates image object
img = mu.image()
# returns numpy array
img.numpy()
# using Pillow, saves DICOM image
img.save_as_pil("ex1.jpg")
# using matplotlib, saves DICOM image
img.save_as_plt("ex1_2.jpg")

Documentation

Full documentation is available at https://mudicom.readthedocs.org/

Requirements

  • Python 2.7
  • GDCM with python wrapper

Credits

Written by Eric Bower

Special thanks to Mathieu Malaterre (primary developer for GDCM), of whom without this package would not be possible.

Change Log

v0.0.2, 08-14-2014

Updated packaging description

v0.0.1, 04-04-2014

Initial release.

 
File Type Py Version Uploaded on Size
mudicom-0.0.2.tar.gz (md5) Source 2014-08-14 10KB
  • Downloads (All Versions):
  • 19 downloads in the last day
  • 160 downloads in the last week
  • 533 downloads in the last month
  • Author: Eric Bower
  • Home Page: https://github.com/neurosnap/mudicom
  • Keywords: dicom,gdcm,imaging,medical,images
  • License:
    The MIT License
    ===============
    
    Copyright (c) 2014 Eric Bower
    
    Permission is hereby granted, free of charge, to any person obtaining a copy
    of this software and associated documentation files (the "Software"), to deal
    in the Software without restriction, including without limitation the rights
    to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
    copies of the Software, and to permit persons to whom the Software is
    furnished to do so, subject to the following conditions:
    
    The above copyright notice and this permission notice shall be included in
    all copies or substantial portions of the Software.
    
    THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
    IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
    FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
    AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
    LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
    OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
    THE SOFTWARE.
  • Categories
  • Package Index Owner: neurosnap
  • DOAP record: mudicom-0.0.2.xml