neurocurator 0.4.1

Getting Started

Requirements:

System side:

• Git 1.7.0+

• ImageMagick 6

• Python 3.4*

• Qt 4.8.7*

• Miniconda*

Python side:

• NAT

• PySide 1.2.4

• NumPy

• pandas

• Wand

*Miniconda is not required. It simplifies only temporary the installation: no need to compile Qt and to install manually Python 3.4.

Installation:

Create a virtual environment with Python 3.4:

conda create -y --name nc python=3.4

Switch to the virtual environment:

source activate nc

Install PySide 1.2.4 and Qt 4.8.7 from conda-forge:

conda install -y pyside --channel conda-forge

Install NeuroCurator:

pip install nat
pip install neurocurator --no-deps

Launch NeuroCurator:

neurocurator

For the future uses: 1. enter the virtual environment: source activate nc 2. launch NeuroCurator: neurocurator 3. use NeuroCurator 4. close NeuroCurator 5. exit the virtual environment: source deactivate

Releases

Versions and their notable changes are listed in the releases section.

Status

Created during 2016.

Ongoing stabilization and reengineering in the branch refactor-architecture.

The branch refactor-architecture is not intended to be used by end-users.

New features, bug fixes and improvements are done on the reengineered code sections.

When a reengineered code section is stable, it’s merged into the branch master and a release is published.