Skip to main content

PPANINI: Prioritization and Prediction of functional Annotations for Novel and Important genes via automated data Network Integration.

Project description

PPANINI (Prioritization and Prediction of functional Annotations for Novel and Important genes via automated data Network Integration) provides a computational pipeline to prioritize microbial genes based on their metagenomic properties (e.g. prevalence and abundance). The resulting prioritized list of gene candidates can then be analyzed further using our visualization tools. PPANINI prioritizes important genes in a microbial community based on presenceabsence and abundance from metagenomic data. Sequencing a metagenome typically produces millions of short DNA/RNA reads. PPANINI takes a genes abundances table for all the samples in a study, it ranks the important genes

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

ppanini-0.7.3.1.tar.gz (55.7 MB view hashes)

Uploaded Source

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page