skip to navigation
skip to content

Not Logged In

precursor 1.1

Compute minimal metabolic precursors sets that enable the production of target metabolites.

Latest Version: 1.2.1

Installation

You can install precursor by running:

$ pip install --user precursor

Usage

Typical usage is:

$ precursor.py --autoseeds network targets

For more options you can ask for help as follows:

$ precursor.py --help
usage: precursor.py [-h] [--autoseeds] net inputs

positional arguments:
  net          metabolic network in SBML format
  inputs       targets in XML format

optional arguments:
  -h, --help   show this help message and exit
  --autoseeds  compute possible seed metabolites

Samples

An archive with sample files is available here:
precursor_data.tar.gz
 
File Type Py Version Uploaded on Size
precursor-1.1.tar.gz (md5) Source 2014-01-16 328KB
  • Downloads (All Versions):
  • 8 downloads in the last day
  • 59 downloads in the last week
  • 412 downloads in the last month