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precursor 1.1

Compute minimal metabolic precursors sets that enable the production of target metabolites.

Latest Version: 1.2.2

Installation
============

You can install precursor by running::

$ pip install --user precursor


Usage
=====

Typical usage is::

$ precursor.py --autoseeds network targets

For more options you can ask for help as follows::

$ precursor.py --help
usage: precursor.py [-h] [--autoseeds] net inputs

positional arguments:
net metabolic network in SBML format
inputs targets in XML format

optional arguments:
-h, --help show this help message and exit
--autoseeds compute possible seed metabolites


Samples
=======

An archive with sample files is available here:
precursor_data.tar.gz_

.. _precursor_data.tar.gz: http://www.cs.uni-potsdam.de/~sthiele/bioasp/downloads/samples/precursor_data.tar.gz  
File Type Py Version Uploaded on Size
precursor-1.1.tar.gz (md5) Source 2014-01-16 328KB
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