A set of standalone application and pipelines dedicated to NGS (new generation sequencing) analysis

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License: BSD License (new BSD)

Author: yourname

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Project description

https://badge.fury.io/py/sequana.svg https://travis-ci.org/sequana/sequana.svg?branch=master https://coveralls.io/repos/github/sequana/sequana/badge.svg?branch=master Documentation Status
Python version:

3.5 (and 2.7 without snakemake)

Online documentation:

On readthedocs

Issues and bug reports:

On github

How to cite:

Desvillechabrol D, Bouchier C, Cokelaer T and Kennedy S. Sequana: a set of flexible genomic pipelines for processing and reporting NGS analysis [v1; no peer reviewed]. F1000Research 2016, 5:1767 (poster) (doi: 10.7490/f1000research.1112656.1)

Sequana includes a set of pipelines related to NGS (new generation sequencing) including quality control, variant calling, coverage, taxonomy…

Please see the documentation for an up-to-date status and documentation.

Docker images (experimental):

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Project details

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Avatar for cokelaer from gravatar.com cokelaer

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License: BSD License (new BSD)

Author: yourname

Classifiers

Release history Release notifications | RSS feed

0.16.11

0.16.10

0.16.9

0.16.8

0.16.7

0.16.6

0.16.5

0.16.4

0.16.3

0.16.2

0.16.1

0.16.0

0.15.4

0.15.3

0.15.2

0.15.1

0.15.0

0.14.6

0.14.5

0.14.4

0.14.3

0.14.2

0.14.1

0.14.0

0.13.2

0.13.1

0.13.0

0.12.7

0.12.6

0.12.5

0.12.4

0.12.3

0.12.2

0.12.1

0.12.0

0.11.1

0.11.0

0.10.0

0.9.8

0.9.7

0.9.6

0.9.5

0.9.4

0.9.3

0.9.2

0.9.1

0.9.0

0.8.6

0.8.5

0.8.4

0.8.3

0.8.2

0.8.1

0.8.0

0.7.1

0.7.0

0.6.5.post3

0.6.5.post2

0.6.5.post1

0.6.4

0.6.3.post1

0.6.3

0.6.2

0.6.1

0.6.0

0.5.2

0.5.1

0.5.0

0.4.2

0.4.1

0.4.0

0.3.0

0.2.1

0.2.0

0.1.21

0.1.20

0.1.19

0.1.18

0.1.17.1

0.1.16

This version

0.1.15

0.1.14

0.1.13

0.1.12

0.1.11

0.1.10

0.1.9

0.1.8

0.1.7

0.1.6

0.1.5

0.1.4

0.1.2

0.1.1

0.1.0

0.0.3

0.0.2

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