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squillo 0.1.4

manipulate microarray datasets contained in SQLITE3 databases.

Squillo is a package for loading and accessing microarray datasets stored in SQLITE3 databases. This is aa sort of next-generation matricks package, which provided all sorts of methods for accessing and manipulating mircoarray data, but stored these in pickled form, which made ad-hoc retrieval a bit too slow. SQUILLO attempts to preserve the same functionality (particularly the ability to aggregate columns) while greatly increasing speed. Moreover, because the microarray data are now stored in SQLITE3 databases, these can be easily distributed as updates become available, and can also be used with other platforms and applications.

 
File Type Py Version Uploaded on Size
squillo-0.1.4-py2.7.egg (md5) Python Egg 2.7 2013-02-21 32KB
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