21 projects
filepattern
Utilities for parsing files in a directory based on a file name pattern.
sophios
DSL for inferring the edges of a CWL workflow DAG
bfiocpp
Tensorstore Based Backend for BFIO
napari-nyxus
A napari plugin for calculating features from intensity-label image data
microjson
MicroJSON is a library for validating, parsing, and manipulating MicroJSON data.
jupyterlab-polus-render
A Jupyterlab extension for Polus Render.
argolid
Pyramid Generator For OMETiff
nyxus-cuda12x
Scalable library for calculating features from intensity-label image data
nyxus-cuda11x
Scalable library for calculating features from intensity-label image data
nyxus
Scalable library for calculating features from intensity-label image data
bfio
Simple reading and writing classes for tiled tiffs using Bio-Formats.
theia-py
Theia: Bleed-Through Correction in Fluorescent Microscopy Images
polus-render
Displays Polus Render dashboard in JupyterLabs.
preadator
Process and Thread Management Utility.
napari-bfio
A plugin to read and write images using bfio within napari
compute-api-client
A client library for accessing Compute API
rxiv-types
Rxiv XML/JSON parsing and typehints.
pubmed-types
Pubmed XML parsing and typehints.
dock8r
CLI translating common Docker commands to run containers in K8s
sos-java
SoS Notebook extension for Java
sos-xeus-cling
SoS Notebook extension for C++
