24 projects
pynblast
NBLAST neuron morphology comparison in python (over rust)
backports.strenum
Base class for creating enumerated constants that are also subclasses of str
catmaid-publish
Scripts for publishing data from CATMAID
extreqs
Parse python requirements.txt files into setuptools extras
ncollpyde
A python wrapper around a subset of the ncollide rust library
retractions
Check DOIs for retractions
jfibsem-dat
molesq
Implementation of moving least squares for ND point and image deformation
flexfs
Python tools for querying Flexible File Structure
f-it
citepy
Automatically create citations for packages
catmaid-catnap
Experiments working with CATMAID and napari
hcl
Interactive CLI for exploring HDF5 files
catpy
Python client for the CATMAID API
fran
Annotate frames of a multiTIFF video
coordinates
Convenience class for doing maths with explicit coordinates
pyenv-mkenv
Simple script to help create and use pyenv virtualenvs
h5py-like
Abstract base classes for making h5py-like objects.
yarqueue
Yet Another python queue backed by redis; but modern and compliant
smalldataviewer
Command-line tool and python library for visualising small 3D datasets
mpl-colors
Enums representing named colors available in matplotlib
pipe2codeblock
Pipe text into a code block in a markdown file.
tempcase
Utilities for handling python test cases with temporary directories and files, for people using `pyunit`/`unittest`.
toolup
Convenience package for installing python-based development tools
