29 projects
scikit-image
Image processing in Python
napari-animation
A plugin for making animations in napari
iterseg
napari plugin for iteratively improving unet-watershed segmentation
npe2
napari plugin engine v2
platetrack
napari plugin for tracking platelets with trackpy
plateletanalysis
plateletanalysis
annotrack
napari plugin for annotating tracks to estimate error rates
magicgui
build GUIs from python types
napari
n-dimensional array viewer in Python
affinder
Quickly find the affine matrix mapping one image to another using manual correspondence points annotation
napari-tiff
official napari tiff reader and writer.
napari-sphinx-theme
Bootstrap-based Sphinx theme from the napari community
napari-graph
Fast editable graphs in Python and numba
zarpaint
Paint segmentations directly to on-disk/remote zarr arrays
nd2-dask
Plugin to load nd2 data into napari
skan
Skeleton analysis in Python
napari-plugin-manager
Install plugins for napari, in napari.
ont
Collection of random functions that @jni finds useful
mysquishy
Recompress zarr chunks in-place
platelet-unet-watershed
Segment platelets with pretrained unet and affinity watershed
napari-plugin-engine
napari plugin engine, fork of pluggy
viridis
Tree data structures and algorithms
llc-tools
Prettier LowLevelCallables
mpl-volume-viewer
matplotlib orthoslice volume viewer in Python
h5cat
Quick preview of hdf5 files
llc
Prettier LowLevelCallables
skimage
Dummy package that points to scikit-image
microscopium
Clustering of High Content Screen Images
cellom2tif
Convert Cellomics images to TIFF.
