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Asdf extension to support Zarr arrays

Project description

ASDF serialization support for Zarr

CI Status

This packages includes a plugin for the Python library asdf to add support for reading and writing chunked Zarr arrays.

Installation

This plugin is not yet stable and released on PyPi and requires features only available in the current development head of ASDF.

$ pip install git+https://github.com/asdf-format/asdf
$ pip install git+https://github.com/asdf-format/asdf-zarr

Or alternatively by cloning and installing each package.

$ git clone https://github.com/asdf-format/asdf
$ cd asdf
$ pip install .
$ cd ../
$ git clone https://github.com/asdf-format/asdf-zarr
$ cd asdf-zarr
$ pip install .

Usage

For background on ASDF array storage and examples of how to use this extension see the notebooks subdirectory of this repository.

Testing

pytest is used for testing. Tests can be run (from the source checkout of this repository):

$ pytest

Contributing

We welcome feedback and contributions to this project.

Project details


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