Code generation for cardiac Chaste
Reason this release was yanked:
Has issues with stimulus sign being incorrect
Project description
Code generation for cardiac Chaste
The chaste_codegen
module takes CellML models as input, via cellmlmanip to read and manipulate them, then uses templating to generate C++ code.
The jinja2 templating engine is used.
Installing
We recommend installing chaste_codegen in a virtual environment (using virtualenv or conda)
Users install chaste_codegen
using pip.
pip install chaste_codegen
Using chaste_codegen
After installation, chaste_codegen can be called using the chaste_codegen
command:
usage: chaste_codegen [-h] [--version] [-t TYPE] [-o OUTFILE]
[--use-analytic-jacobian] [-c CLASS_NAME] [-y]
[--use-modifiers]
cellml_file
For more information about the available options call
chaste_codegen -h
Release notes
For release notes see RELEASE.md
Documentation
API documentation explaining how to use cellmlmanip can be found on readthedocs
Contributing
For guidelines on contributing to chaste_codegen
, please see CONTRIBUTING.md.
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