Simulate genealogical trees and genomic sequence data using population genetic models
Project description
msprime
msprime
is a population genetics simulator
based on tskit. Msprime can simulate random
ancestral histories for a sample of individuals
(consistent with a given demographic model) under a
range of different models and evolutionary processes. Msprime can
also simulate mutations on a given ancestral
history (which can be produced by msprime or other programs
supporting tskit) under
a variety of genome sequence evolution models.
Please see the documentation for more details, including installation instructions.
Research notice
Please note that this repository is participating in a study into sustainability of open source projects. Data will be gathered about this repository for approximately the next 12 months, starting from 2021-06-04.
Data collected will include number of contributors, number of PRs, time taken to close/merge these PRs, and issues closed.
For more information, please visit our informational page or download our participant information sheet.
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distributions
Hashes for msprime-1.1.1-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 2624da77b02f58d976a4b94c7a2775d76a45d72d90c739b51f58c9363f601b58 |
|
MD5 | afe4fa71d5f98831678e85c3d449803e |
|
BLAKE2b-256 | 3b0c7dfce7c79f81ab54eb97ff8b763a3211edf876aa2efe66ededdbcf079b68 |
Hashes for msprime-1.1.1-cp39-cp39-macosx_10_15_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | b7a7e3379eb34c16d5c98414f111cd847b837e7789a48d21699b5863b1621782 |
|
MD5 | bc8b91a53a5f736666343b99d603da90 |
|
BLAKE2b-256 | 74d92c7dad62baba62b2f17eeccef67f726c5585c4c5ec0ccbd34ac25cf2b598 |
Hashes for msprime-1.1.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 600d05b2042dbc540b9a14dbdfa2a4889edbaeb8bd55d00f17d215a634d013ac |
|
MD5 | b902ab43ac387d5c96355a6310b75800 |
|
BLAKE2b-256 | 94bdd419697d4e024573a92fcbecfbb58251ba987498dac70398634e4ced5509 |
Hashes for msprime-1.1.1-cp38-cp38-macosx_10_14_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 1824200fcf5276d5b7696884cc8b2ccc215445e8606e85b6231cfa0af23e9017 |
|
MD5 | fe8f0f575c0e02c0322f90f0c3e1ef84 |
|
BLAKE2b-256 | 7585b6c7cfa22b13b161757c0e0dc735d3ccaaeb3633ccc151de82a56ef7dfb5 |
Hashes for msprime-1.1.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | fc6fa397c61c71b94d8090efbfbc2ed7254ec9bbd3db447ab46a3a2b47e316f1 |
|
MD5 | 693e7143edfef98b70eaf92624d5dbd5 |
|
BLAKE2b-256 | 37a35ee682748327938904d463993bb58cb2ddb26b0ed2536921be0a53d5c783 |
Hashes for msprime-1.1.1-cp37-cp37m-macosx_10_14_x86_64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 6ba20a6f971fedc14a783418039914d0415e825fa1a237b9ba9f95303deeea77 |
|
MD5 | 0a7dbbec635fbfcefb385bec61e7627e |
|
BLAKE2b-256 | 6a84bdfedf987509498250b9fbca2fa5be2bf580a7f5535d65d6bf50899a756b |