sourmash plugin to build venn diagrams.
Project description
sourmash_plugin_venn: generate a simple Venn diagram for two sourmash sketches
Generate Venn diagrams showing overlaps between two sourmash sketches of DNA or protein sequences:
Examples
sourmash scripts venn examples/a.sig.gz examples/b.sig.gz -o a-b.png
sourmash scripts venn examples/a.sig.gz examples/b.sig.gz -o a-b.png --name1 A --name2 B
sourmash scripts venn examples/a.sig.gz examples/b.sig.gz examples/c.sig.gz -o a-b-c.png
sourmash scripts venn examples/a.sig.gz examples/b.sig.gz examples/c.sig.gz -o a-b-c.png --name1 A --name2 B --name3 C
Installation
pip install sourmash_plugin_venn
Dev docs
venn
is developed at https://github.com/sourmash-bio/sourmash_plugin_venn.
Testing
Run:
pytest tests
Generating a release
Bump version number in pyproject.toml
and push.
Make a new release on github.
Then pull, and:
python -m build
followed by twine upload dist/...
.
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