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Read/write/validate/query BIDS datasets

Project description

About ancp-bids

A Python package which allows to:

  • read/write
  • query
  • validate

BIDS datasets using the BIDS Schema as its foundation.

Current state and further reading

We are in a proposal/experimental stage and design decisions may change frequently. You can follow the progress of the proposal in the following slides:

https://docs.google.com/presentation/d/12x3cQGRD9-T1bkpK--t0e_OdgMb3UuO4jn5fGpj0a4w

Installation

You can install the tool directly from PyPI:

pip install ancpbids

Basic Usage, the PyBIDS way

from ancpbids import BIDSLayout
ds_path = "my-datasets/bids-001"
layout = BIDSLayout(ds_path)
first_run_bold_files = layout.get(run='1', suffix='bold', return_type='filename')
...

Validation

...

Complex Queries

...

Creating new datasets

...

Project details


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