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WebApollo API library

Project description

https://travis-ci.org/galaxy-genome-annotation/python-apollo.svg?branch=master Documentation Status

Apollo is a Python library for interacting with WebApollo

Examples

from apollo import WebApolloInstance
wa = WebApolloInstance('https://fqdn/apollo', 'jane.doe@fqdn.edu', 'password')

orgs = wa.organisms.addOrganism(
    "Yeast",
    "/path/to/jbrowse/data",
    genus='Saccharomyces',
    species='cerevisiae',
    public=False
)

# Give webapollo a second to process the uploaded organism.
time.sleep(1)

# Then add yourself to permission list
data = wa.users.updateOrganismPermission(
    wa.me, "Yeast",
    write=True,
    export=True,
    read=True,
)

History

  • 2.0
    • Galaxy Functions

    • TTL Cache to work around Galaxy’s behaviour

    • Status and Canned* Clients from [@abretaud](https://github.com/abretaud)

  • 1.0
    • Initial release

License

Available under the MIT License

Project details


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