A BioIO reader plugin for reading simple image formats using imageio.
Project description
bioio-imageio
A BioIO reader plugin for reading all these formats using imageio
Documentation
See the full documentation on our GitHub pages site - the generic use and installation instructions there will work for this package.
Information about the base reader this package relies on can be found in the bioio-base
repository here
Installation
Stable Release: pip install bioio-imageio
Development Head: pip install git+https://github.com/bioio-devs/bioio-imageio.git
Example Usage (see full documentation for more examples)
Install bioio-imageio alongside bioio:
pip install bioio bioio-imageio
This example shows a simple use case for just accessing the pixel data of the image
by explicitly passing this Reader
into the BioImage
. Passing the Reader
into
the BioImage
instance is optional as bioio
will automatically detect installed
plug-ins and auto-select the most recently installed plug-in that supports the file
passed in.
from bioio import BioImage
import bioio_imageio
img = BioImage("my_file.mp4", reader=bioio_imageio.Reader)
img.data
Issues
Click here to view all open issues in bioio-devs organization at once or check this repository's issue tab.
Development
See CONTRIBUTING.md for information related to developing the code.
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Hashes for bioio_imageio-1.0.0-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 98e654ca9c561605409490f5295cd56e51341e3d2aa6f97fc41762aa6e7c4ecf |
|
MD5 | 7ac5f74a9e8ee1c78a1d5e3ab07a9b0f |
|
BLAKE2b-256 | a343b450c3ef3fed066fc6968cc3cd3dab5b7a7b96d66630d97c233b1c01c5ad |