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A BioIO reader plugin for reading Zarr files in the OME format.

Project description

bioio-ome-zarr

Build Status Documentation

A BioIO reader plugin for reading Zarr files in the OME format.

This plugin is intended to be used in conjunction with bioio

Installation

Stable Release: pip install bioio-ome-zarr
Development Head: pip install git+https://github.com/BrianWhitneyAI/bioio-ome-zarr.git

Quickstart

from bioio_ome_zarr import Reader 

r = Reader("my-image.zarr")
r.dims

Documentation

For full package documentation please visit BrianWhitneyAI.github.io/bioio-ome-zarr.

Development

See CONTRIBUTING.md for information related to developing the code.

MIT License

Project details


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