CADA: The Next Generation

This is a re-implementation of the CADA method for phenotype-similarity prioritization.

• Free software: MIT license
• Documentation: https://cada-prio.readthedocs.io/en/latest/
• Discussion Forum: https://github.com/bihealth/cada-prio/discussions
• Bug Reports: https://github.com/bihealth/cada-prio/issues

Managing GitHub Project with Terraform

# export GITHUB_OWNER=bihealth
# export GITHUB_TOKEN=ghp_<thetoken>

# cd utils/terraform

# terraform init
# terraform import github_repository.cada-prio cada-prio
# terraform validate
# terraform fmt
# terraform plan
# terraform apply

Changelog

0.2.0 (2023-09-08)

Features

• gene to phenotype links file can be gziped (#5) (66c48bf)

0.1.0 (2023-09-07)

Features

• adding REST API server for prediction (#4) (8bb7516)
• initial training implementation (#1) (10d3a7c)
• prioritization prediction with model (#3) (48d504c)