Functions to manipulate graph in the context of signalling pathways
Project description
The package cellnopt.core provides tools to manipulate signalling pathways. It provides I/O functions for SIF, MIDAS, SOP formats and a convenient graph data structure.
Here is a simple example that creates a graph and plots it using dot/graphviz:
from cellnopt.core import * c = CNOGraph() c.add_reaction("A=B") c.add_reaction("A+B=C") c.plotdot()
For a full documentation, see the sphinx documentation in the ./doc directory.