GUI to visualize and process variant data
Project description
# Cutevariant
cutevariant is a light standalone viewer of genetic variation written in Python for Qt. It allows you to view and filter VCF and other format files.
# Installation
pip install cutevariant # install cutevariant # run
## Developement in progress Complete rewrite from Cpp to Python
### To get tests running
git clone git@github.com:labsquare/cutevariant.git cd cutevariant virtualenv -p /usr/bin/python3 venv source ven/bin/activate make install_deps # install make run # start application make test # start tests
### Development & release cycle
Use [zest.releaser](https://zestreleaser.readthedocs.io) to handle the version and distribution through pypi.
pip install zest.releaser[recommended]
To yield a new release, use:
fullrelease
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