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Yet another file deduplicator

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Yet another file deduplicator.

About

What are the use cases?

  • I have downloaded photos and videos from the cloud. Oh, both Google Photos and Youtube shrink the file and changes the format. Moreover, it have shortened the file name to 47 characters and capitalize the extension. So how should I know that I have them all backed up offline?
  • My disk is cluttered with several backups and I'd like to be sure these are all just copies.
  • I merge data from multiple sources. Some files in the backup might have the former orignal file modification date that I might wish to restore.

What is compared?

  • The file name.

Works great when the files keep more or less the same name. (Photos downloaded from Google have its stem shortened to 47 chars but that is enough.) Might ignore case sensitivity.

  • The file date.

You can impose the same file mtime, tolerate few hours (to correct timezone confusion) or ignore the date altogether.

  • The file size, the image hash or the video frame count.

The file must have the same size. Or take advantage of the media magic under the hood which ignores the file size but compares the image or the video inside. It is great whenever you end up with some files converted to a different format.

  • The contents?

You may use checksum=True to perform CRC32 check. However for byte-to-byte checking, when the file names might differ or you need to check there is no byte corruption, some other tool might be better way, i.e. jdupes.

Why not using standard sync tools like meld?

These imply the folders have the same structure. Deduplidog is tolerant towards files scattered around.

Doubts?

The program does not write anything to the disk, unless execute=True is set. Feel free to launch it just to inspect the recommended actions. Or set bashify=True to output bash commands you may launch after thorough examining.

Launch

It works as a standalone program with both CLI and TUI interfaces. Just launch the deduplidog command. Moreover, it works best when imported from a Jupyter Notebook.

Examples

Let's take a closer look to a use-case.

import logging
from deduplidog import Deduplidog

Deduplidog("/home/user/duplicates", "/media/disk/origs", ignore_date=True, rename=True)
Find files by size, ignoring: date, crc32
Duplicates from the work dir at 'home' would be (if execute were True) renamed (prefixed with ✓).
Number of originals: 38
* /home/user/duplicates/foo.txt
  /media/disk/origs/foo.txt
  🔨home: renamable
  📄media: DATE WARNING + a day
Affectable: 38/38
Affected size: 59.9 kB
Warnings: 1

We found out all the files in the duplicates folder seem to be useless but one. It's date is earlier than the original one. See with full log.

Deduplidog("/home/user/duplicates", "/media/disk/origs", ignore_date=True, rename=True, set_both_to_older_date=True, logging_level=logging.INFO)
Find files by size, ignoring: date, crc32
Duplicates from the work dir at 'home' would be (if execute were True) renamed (prefixed with ✓).
Original file mtime date might be set backwards to the duplicate file.
Number of originals: 38
* /home/user/duplicates/foo.txt
  /media/disk/origs/foo.txt
  🔨home: renamable
  📄media: redatable 2022-04-28 16:58:56 -> 2020-04-26 16:58:00
* /home/user/duplicates/bar.txt
  /media/disk/origs/bar.txt
  🔨home: renamable
* /home/user/duplicates/third.txt
  /media/disk/origs/third.txt
  🔨home: renamable
  ...
Affectable: 38/38
Affected size: 59.9 kB

You see, the log is at the most brief, yet transparent form. The files to be affected at the work folder are prepended with the 🔨 icon whereas those affected at the original folder uses 📄 icon. We might add execute=True parameter to perform the actions. Or use bashify=True to inspect.

Deduplidog("/home/user/duplicates", "/media/disk/origs", ignore_date=True, rename=True, set_both_to_older_date=True, bashify=True)

The bashify=True just produces the commands we might use.

touch -t 1524754680.0 /media/disk/origs/foo.txt
mv -n /home/user/duplicates/foo.txt /home/user/duplicates/✓foo.txt
mv -n /home/user/duplicates/bar.txt /home/user/duplicates/✓bar.txt
mv -n /home/user/duplicates/third.txt /home/user/duplicates/✓third.txt

Documentation

Parameters

Import the Deduplidog class and change its parameters.

from deduplidog import Deduplidog

Or change these parameter from CLI or TUI, by launching deduplidog.

Find the duplicates. Normally, the file must have the same size, date and name. (Name might be just similar if parameters like strip_end_counter are set.) If media_magic=True, media files receive different rules: Neither the size nor the date are compared. See its help.

parameter type default description
work_dir str | Path - Folder of the files suspectible to be duplicates.
original_dir str | Path - Folder of the original files. Normally, these files will not be affected.
(However, they might get affected by treat_bigger_as_original or set_both_to_older_date).
Actions
execute bool False If False, nothing happens, just a safe run is performed.
bashify bool False Print bash commands that correspond to the actions that would have been executed if execute were True.
You can check and run them yourself.
affect_only_if_smaller bool False If media_magic=True, all writing actions like rename, replace_with_original, set_both_to_older_date and treat_bigger_as_original
are executed only if the affectable file is smaller than the other.
rename bool False If execute=True, prepend ✓ to the duplicated work file name (or possibly to the original file name if treat_bigger_as_original).
Mutually exclusive with replace_with_original and delete.
delete bool False If execute=True, delete theduplicated work file name (or possibly to the original file name if treat_bigger_as_original).
Mutually exclusive with replace_with_original and rename.
replace_with_original bool False If execute=True, replace duplicated work file with the original (or possibly vice versa if treat_bigger_as_original).
Mutually exclusive with rename and delete.
set_both_to_older_date bool False If execute=True, media_magic=True or (media_magic=False and ignore_date=True), both files are set to the older date. Ex: work file get's the original file's date or vice versa.
treat_bigger_as_original bool False If execute=True and rename=True and media_magic=True, the original file might be affected (by renaming) if smaller than the work file.
Matching
casefold bool False Case insensitive file name comparing.
checksum bool False If media_magic=False and ignore_size=False, files will be compared by CRC32 checksum.
(This mode is considerably slower.)
tolerate_hour int | tuple[int, int] | bool False When comparing files in work_dir and media_magic=False, tolerate hour difference.
Sometimes when dealing with FS changes, files might got shifted few hours.
* bool → -1 .. +1
* int → -int .. +int
* tuple → int1 .. int2
Ex: tolerate_hour=2 → work_file.st_mtime -7200 ... + 7200 is compared to the original_file.st_mtime
ignore_date bool False If media_magic=False, files will not be compared by date.
ignore_size bool False If media_magic=False, files will not be compared by size.
space2char bool | str False When comparing files in work_dir, consider space as another char. Ex: "file 012.jpg" is compared as "file_012.jpg"
strip_end_counter bool False When comparing files in work_dir, strip the counter. Ex: "00034(3).MTS" is compared as "00034.MTS"
strip_suffix str False When comparing files in work_dir, strip the file name end matched by a regular. Ex: "001-edited.jpg" is compared as "001.jpg"
work_file_stem_shortened int None Photos downloaded from Google have its stem shortened to 47 chars. For the comparing purpose, treat original folder file names shortened.
Media
media_magic bool False Nor the size or date is compared for files with media suffixes.
A video is considered a duplicate if it has the same name and a similar number of frames, even if it has a different extension.
An image is considered a duplicate if it has the same name and a similar image hash, even if the files are of different sizes.
(This mode is considerably slower.)
accepted_frame_delta int 1 Used only when media_magic is True
accepted_img_hash_diff int 1 Used only when media_magic is True
img_compare_date bool False If True and media_magic=True, the file date or the EXIF date must match.

Utils

In the deduplidog.utils packages, you'll find a several handsome tools to help you. You will find parameters by using you IDE hints.

images

urls: Iterable[str | Path] Display a ribbon of images.

print_video_thumbs

src: str | Path Displays thumbnails for a video.

print_videos_thumbs

dir_: Path To quickly understand the content of each video, output the duration and the first few frames.

get_frame_count

filename: str|Path Uses cv2 to determine the video frame count. Method is cached.

search_for_media_wizzard

cwd: str Repeatedly prompt and search for files with similar names somewhere in the specified path. Display all such files as images and video previews.

are_contained

work_dir: str, original_dir: str, sec_range: int = 60 You got two dirs with files having different naming system (427.JPG vs DSC_1344) which you suspect to contain the same set. The same files in the dirs seem to have the same timestamp. The same timestamp means +/- sec_range (ex: 1 minute). Loop all files from work_dir and display corresponding files having the same timestamp. or warn that no original exists.

remove_prefix_in_workdir

work_dir: str Removes the prefix ✓ recursively from all the files. The prefix might have been previously given by the deduplidog.

mark_symlink_by_target

suspicious_directory: str | Path, starting_path: str If the file is a symlink, pointing to this path, rename it with an arrow.

:param suspicious_directory: Ex: /media/user/disk/Takeout/Photos/
:param starting_path: Ex: /media/user/disk

mark_symlink_only_dirs

dir_: str | Path If the directory is full of only symlinks or empty, rename it to an arrow.

mtime_files_in_dir_according_to_json

dir_: str | Path, json_dir: str | Path Google Photos returns JSON with the photo modification time. Sets the photos from the dir_ to the dates fetched from the directory with these JSONs.

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