A genome browser in your Jupyter notebook
Project description
GenomeNotebook
</code></pre>
<blockquote>
<p>Version (0.7.3)</p>
</blockquote>
<h2>Install</h2>
<pre lang="bash"><code>pip install genomenotebook
Upgrade
New versions of genomenotebook are released on a regular basis. Make sure to upgrade your installation to enjoy all the features.
pip install genomenotebook --upgrade
How to use
Create a simple genome browser with a search bar. The sequence appears when zooming in.
Tracks can be added to visualize your favorite genomics data. See Examples for more !!!!
import genomenotebook as gn
g=gn.GenomeBrowser(gff_path=gff_path, genome_path=genome_path, init_pos=10000)
g.show()
Documentation
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
genomenotebook-0.7.4.tar.gz
(21.4 MB
view hashes)
Built Distribution
Close
Hashes for genomenotebook-0.7.4-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 45dcf40a162886029ddb29c243936b101944e3a7d901db2f6aa7466a4a5f99be |
|
MD5 | 591323023d9b5a2241c457cc154f2b75 |
|
BLAKE2b-256 | c3f76933e978bb07d2f801bf55c0cb133435d88f797a11602c74409359147e49 |