Comprehensive analysis of small RNA sequencing Data

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License: MIT License (MIT)

Author: Arun Patil and Marc Halushka

Tags miRge, small RNA analysis, NGS, bioinformatics tools, GUI

Requires: Python >=3.7

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Project description

miRge3.0

An update to Python package to perform comprehensive analysis of small RNA sequencing data, including miRNA annotation, A-to-I editing, novel miRNA detection, isomiR analysis, visualization through IGV, processing Unique Molecular Identifieres (UMI), tRF detection and producing interactive graphical output.

miRge3.0 is developed in python v3.8 and is a recent update of our previous version miRge2.0. This build includes command line interface (CLI) and cross-platform Graphical User Interface (GUI). For more details refer to documentation link below.

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View statistics for this project via Libraries.io, or by using our public dataset on Google BigQuery

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License: MIT License (MIT)

Author: Arun Patil and Marc Halushka

Tags miRge, small RNA analysis, NGS, bioinformatics tools, GUI

Requires: Python >=3.7

Classifiers

Release history Release notifications | RSS feed

0.1.4

0.1.3

0.1.2

0.1.1

0.1.0

0.0.9

0.0.8

0.0.7

0.0.6

0.0.5

This version

0.0.4

0.0.3

0.0.2

0.0.1

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