MITOS
Project description
Thes are the mitogenome related sources including MITOS and other (more or less) helpful tools. Note that some of the tools are unfinished and not in a production state.
Clearly this README is a stub. We are happy to extend the documentation on request. So just send a message if you need further information.
Installation
There are three ways to install. Prefered is the installation via conda since this also takes care of non-python requirements of the main mitos script.
via conda: conda install mitos -c bioconda -m -n mitos
via pip: pip install mitos
manual: pip -r requirements.txt
For the non-python requirements see README.MITOS.
MITOS
runmitos.py: standalone CLI MITOS
see also mitos.py –help README.MITOS
genbank file handling
- refseqsplit:
splits a file consisting of concatenated gb files into single genbank files
its possible to apply filters (taxonomy, prefix)
MISC
- gcpp
pretty print and compare genetic code
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
