Skip to main content

Multiprocessing for Pathway-Tools

Project description

# Pathway-tools multiprocessing script

Python script allowing to run pathway-Tools in multiprocess. To do this the script takes a folder containing sub-folders as input. Each sub-folder contains a genbank file.

Folder_input ├── Folder_for_species_1 │ └── Genbank_species_1 ├── Folder_for_species_2 │ └── Genbank_species_2 ├── Folder_for_species_3 │ └── Genbank_species_3 │

Pathway-Tools will run on each genbank file. It will create an output folder containing all the result files from the PathoLogic inference for each species.

Used in [Pathway-Tools Multiprocessing Docker](https://github.com/ArnaudBelcour/pathway-tools-multiprocessing-docker).

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

mpwt-0.1a1.tar.gz (5.2 kB view hashes)

Uploaded Source

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page