Create fastQC-like plots for Oxford Nanopore sequencing data
Project description
Quality control tools for long read sequencing data aiming to replicate some of the plots made by fastQC.
Creates dynamic plots using bokeh. For an example see here
INSTALLATION
pip install nanoQCor
conda install -c bioconda nanoqc
USAGE
nanoQC [-h] [-v] [-o OUTDIR] fastq positional arguments: fastq Reads data in fastq.gz format. optional arguments: -h, --help show this help message and exit -v, --version Print version and exit. -o, --outdir OUTDIR Specify directory in which output has to be created.
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nanoQC-0.7.0.tar.gz
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