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The Precomputed Functional Connectome Toolkit

Project description

PyPI version shields.io

pfc-toolkit

The Precomputed Functional Connectome Toolkit (pfc-toolkit) is a Python module for functional lesion network mapping using the Precomputed Functional Connectome and is distributed under the 3-Cause BSD license.

The project was started in 2019 by William Drew for his Harvard undergraduate thesis project ('21).

The project was supervised by Dr. Michael D. Fox, MD, PhD first at the Berenson-Allen Center for Noninvasive Brain Stimulation at Beth Israel Deaconess Medical Center and later at the Center for Brain Circuit Therapeutics at Brigham and Women's Hospital.

Installation

Dependencies

pfc-toolkit requires:

  • Python (>=3.6)
  • NumPy
  • SciPy
  • Numba
  • Nibabel
  • Nilearn
  • tqdm
  • natsort
  • importlib

User Installation

Install using pip

pip install -U pfc-toolkit

Usage

Development

Source code

You can check the latest sources with the command:

git clone https://github.com/thewilliamdrew/pfc-toolkit.git

Help and Support

Documentation

Project details


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