Python API to SURFEX

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License: MIT License (MIT)

Author: Trygve Aspelien

Requires: Python >=3.8, <4.0

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Project description

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https://coveralls.io/github/metno/pysurfex

Python API to SURFEX (pysurfex)

An API in python to the external surface model SURFEX.

  • Prepare input and namelists to a SURFEX binary

  • Create atmospheric forcing for offline SURFEX runs

  • Read SURFEX output

  • A scheduler setup to run offline SURFEX experiments

  • Quality control of observations with titanlib

  • Optimal interpolation with gridpp

  • Monitor the observations usage

See online documentation in https://metno.github.io/pysurfex/

Installation of pregenerated packages from pypi (pip)

pip3 install pysurfex

User installation:

pip3 install pysurfex --user

Installation on debian based Linux system

Install the required pacakges (some might be obsolete if the pip packages contain the needed depedencies):

sudo apt-get update
sudo apt-get install -y libudunits2-dev libproj-dev libeccodes0 libeccodes-dev libnetcdf-dev netcdf-bin

The following depencies are needed. Install the non-standard ones e.g. with pip or your system installation system.

General dependencies (from pypi)

numpy
netCDF4
cfunits
pyproj
pyyaml
toml
netCDF4
f90nml
requests

To read NetCDF files:

NetCDF4

To read grib files:

eccodes

from ECMWF https://software.ecmwf.int/wiki/display/ECC/Releases installed with ENABLE_PYTHON=ON

To plot:

matplotlib

To get observations from frost.met.no API:

requests

For Quality control of observations

titanlib
db-sqlite3

For optimal interpolation and observation operators

gridpp

For testing:

pytest

Download the source code, then install pysurfex by executing the following inside the extracted folder:

Install pysurfex

poetry install

Create documentation

cd docs
# Create html documentation
make html

Examples

See https://metno.github.io/pysurfex/#examples

Project details

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License: MIT License (MIT)

Author: Trygve Aspelien

Requires: Python >=3.8, <4.0

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