Python Tools for Investigation and Visualziing Activity within anesthesia records
Project description
Python Tools for Investigating & Visualizing Activity in anesthetic records
A toolkit for extracting, parsing, and processing anesthetic records and making sense of the activity therein, especially intra-operative records.
Installation
Available via PyPI using your favorite python package manager.
$ pip3 install pytiva
What can pytiva do?
- Extract data after export from an electronic health record system
- Define and extract anesthesia activities using intra-operative events or the administration of medications
- Unduplicate these activities by any strata of interest, such as patient or case ID number
- Determine total concurrent activities, including aggregating by day and time
- Visualization of so-called gantt charts and heat maps of activity, as below
Examples of visualizations
Gantt chart of raw activity for one patient
Gantt chart of unduplicated activity for one patient
Heatmap of concurrent activity
Links and further reading
- Get started with a brief tutorial: https://github.com/tjbiel85/pytiva/blob/main/tutorial.ipynb
- Bugs and issue tracking: https://github.com/tjbiel85/pytiva/issues
Project details
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