Skip to main content

Open source enterprise dataflow engine in Django

Project description

Build Status Coverage Status Documentation Status Version on PyPI Supported Python versions

Resolwe is an open source dataflow package for Django framework. We envision Resolwe to follow the Common Workflow Language specification, but the current implementation does not yet fully support it. Resolwe offers a complete RESTful API to connect with external resources. A collection of bioinformatics pipelines is available in Resolwe Bioinformatics.

Docs & Help

Read about architecture, getting started, how to write processes, RESTful API details, and API Reference in the documentation.

To chat with developers or ask for help, join us on Slack.

Install

Prerequisites

Make sure you have Python (2.7 or 3.4+) installed on your system. If you don’t have it yet, follow these instructions.

Resolwe requires PostgreSQL (9.4+). Many Linux distributions already include the required version of PostgreSQL (e.g. Fedora 22+, Debian 8+, Ubuntu 15.04+) and you can simply install it via distribution’s package manager. Otherwise, follow these instructions.

Additionally, installing the psycopg2 dependency from PyPI will require having a C compiler (e.g. GCC) as well as Python and PostgreSQL development files installed on the system.

Note

The preferred way to install the C compiler and Python and PostgreSQL development files is to use your distribution’s packages, if they exist. For example, on a Fedora/RHEL-based system, that would mean installing gcc, python-devel/python3-devel and postgresql-devel packages.

Using PyPI

pip install resolwe

Using source on GitHub

pip install https://github.com/genialis/resolwe/archive/<git-tree-ish>.tar.gz

where <git-tree-ish> can represent any commit SHA, branch name, tag name, etc. in Resolwe’s GitHub repository. For example, to install the latest Resolwe from the master branch, use:

pip install https://github.com/genialis/resolwe/archive/master.tar.gz

Contribute

We welcome new contributors. To learn more, read Contributing section of our documentation.

Project details


Release history Release notifications | RSS feed

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

resolwe-5.0.0.tar.gz (339.7 kB view hashes)

Uploaded Source

Built Distribution

resolwe-5.0.0-py3-none-any.whl (201.2 kB view hashes)

Uploaded Python 3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page