sheet2linkml

A python package for converting the CRDC-H data model, which is currently stored in a Google Sheet. The command line utility built into the package can be used to generate a LinkML representation of the CRDC-H data model.

Installation Requirements and Pre-requisites

• Python 3.7.1 or higher
• poetry

Installing

Create and activate a virtual environment within which you can install the package:

python -m venv .venv
source .venv/bin/activate

Install and update the package using pip:

poetry build
pip install dist/sheet2linkml-1.0.0-py3-none-any.whl

Command Line Client Usage

sheet2linkml --output ~/path/to/crdch_model.yaml --logging-config ~/path/to/logging.ini