Tool to trace cryoEM SPA processing results through the magnification hierarchy provided by EPU

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Requires: Python >=3.8

Project description

An installation of PostgreSQL is required. The easiest way is to work in a conda environment and simply run conda install postgresql.

After installation run

smartem.init -d <path/to/where/data/will/go>

This will run basic database setup. Upon completion this should suggest running a command to set the environment variable SMARTEM_CREDENTIALS which will setup database access credentials for you. The database server is started with

smartem.start -d <path/to/where/data/will/go>

and once you no longer need the server it can be stopped with

smartem.stop -d <path/to/where/data/will/go>

The smartem GUI can be launched (if there is a database server running) with

smartem.launch

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Requires: Python >=3.8


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