Fast Stockholm to A3M Multiple Sequence Alignment reformater
Project description
====
stockholm_reformat
====
Fast Stockholm to A3M Multiple Sequence Alignment reformater
Includes an API and a command line script. The pure Python version is already several times faster than the
Perl script contained in the `MPI Bioinformatics Toolkit. <http://toolkit.tuebingen.mpg.de/reformat/help_params>`
Usage
----
From Python::
stockholm_reformat.parse('inputfile', 'outputfile')
From the command line::
$ stockholm_to_a3m input.sto output.a3m
stockholm_reformat
====
Fast Stockholm to A3M Multiple Sequence Alignment reformater
Includes an API and a command line script. The pure Python version is already several times faster than the
Perl script contained in the `MPI Bioinformatics Toolkit. <http://toolkit.tuebingen.mpg.de/reformat/help_params>`
Usage
----
From Python::
stockholm_reformat.parse('inputfile', 'outputfile')
From the command line::
$ stockholm_to_a3m input.sto output.a3m
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Source Distribution
stockholm_reformat-0.1.tar.gz
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