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Pydra tasks for FSL

Project description

pydra-fsl

PyPI - Version PyPI - Python Version PyPI - Downloads


Pydra tasks for FSL.

Pydra is a dataflow engine which provides a set of lightweight abstractions for DAG construction, manipulation, and distributed execution.

FSL is a comprehensive library of analysis tools for FMRI, MRI and DTI brain imaging data.

Table of contents

Available interfaces

  • bet
    • bet
    • robustfov
  • eddy
  • fast
  • flirt
    • convert_xfm
    • flirt
  • fnirt
    • fnirt
  • utils
    • fslmerge
    • fslreorient2std
    • fslroi

Installation

pip install pydra-fsl

A separate installation of FSL is required to use this package. Please review the FSL installation instructions and licensing details.

Development

This project is managed with Hatch:

pipx install hatch

To run the test suite:

hatch run test:no-cov

To fix linting issues:

hatch run lint:fix

License

pydra-fsl is distributed under the terms of the Apache License, Version 2.0.

Project details


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pydra_fsl-0.0.4.tar.gz (14.6 kB view hashes)

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Built Distribution

pydra_fsl-0.0.4-py3-none-any.whl (18.1 kB view hashes)

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