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Gurobi log file tools for parsing and exploring data

Project description

GRBlogtools

PyPI License Test Python Package

Extract information from Gurobi log files and generate pandas DataFrames or Excel worksheets for further processing. Also includes a wrapper for out-of-the-box interactive visualizations using the plotting library Plotly.

performance plot

Installation

python -m pip install grblogtools

It is recommended to prepend the pip install command with python -m to ensure that the package is installed using the correct Python version currently active in your environment.

See CHANGELOG for added, removed or fixed functionality.

Usage

First, you need a set of Gurobi log files to compare, e.g.,

  • results from several model instances
  • comparisons of different parameter settings
  • performance variability experiments involving multiple random seed runs
  • ...

You may also use the provided grblogtools.ipynb notebook with the example data set to get started. Additionally, there is a Gurobi TechTalk demonstrating how to use grblogtools (YouTube):

Pandas/Plotly

  1. parse log files:

    import grblogtools as glt
    
    results = glt.parse(["run1/*.log", "run2/*.log"])
    summary = results.summary()
    nodelog_progress = results.progress("nodelog")
    

    Depending on your requirements, you may need to filter or modify the resulting DataFrames.

  2. draw interactive charts, preferably in a Jupyter Notebook:

    • final results from the individual runs:
    glt.plot(summary, type="box")
    
    • progress charts for the individual runs:
    glt.plot(nodelog_progress, y="Gap", color="Log", type="line")
    
    • progress of the norel heuristic (note, the time recorded here is since the start of norel, and does not include presolve + read time):
    glt.plot(results.progress("norel"), x="Time", y="Incumbent", color="Log", type="line")
    

    These are just examples using the Plotly Python library - of course, any other plotting library of your choice can be used to work with these DataFrames.

Excel

Convert your log files to Excel worksheets right on the command-line:

python -m grblogtools myrun.xlsx data/*.log

List all available options and how to use the command-line tool:

python -m grblogtools --help

Rename log files

The command line tool can also rename log files according to the parameters set and model solved in a given run. This is useful if your log files do not have a consistent naming scheme, or if multiple runs are logged per file and you want to extract the individual runs.

For example:

python -m grblogtools --write-to-dir nicenames summary.xlsx tests/assets/combined/*.log

separates logs for individual runs in the input files and writes copies to the 'nicenames' folder with a consistent naming scheme:

> ls nicenames
912-MIPFocus1-Presolve1-TimeLimit600-glass4-0.log
912-MIPFocus1-Presolve1-TimeLimit600-glass4-1.log
912-MIPFocus1-Presolve1-TimeLimit600-glass4-2.log
912-MIPFocus2-Presolve1-TimeLimit600-glass4-0.log
912-MIPFocus2-Presolve1-TimeLimit600-glass4-1.log
912-MIPFocus2-Presolve1-TimeLimit600-glass4-2.log
912-Presolve1-TimeLimit600-glass4-0.log
912-Presolve1-TimeLimit600-glass4-1.log
912-Presolve1-TimeLimit600-glass4-2.log

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